So , If I understand correctly , the 4 strips are in sequence , ie one after the other and one of them seems to be GRB ?
First check your channel definitions on the controller and player very carefully , to make sure that they are not slightly off. have u tried swapping them to confirm that the orientation is differnt ?
In xl , you will need 2 models -one for RGB (3 strips ) and the other GRB and then you can add them to a Group.
I dont know about the aplhaPix controller to advise if it can be changed on the controller, other controllers do allow you to specify the start channel of an output where the orientation needs to change.