I started a new sequence at 50ms and imported the effects from the old sequence. Converted it, and it seems the timing is pretty spot on, however many of my effect have suffered and lost quality. For example, I have a few spots in the song that fade quickly in between red and green, however once I converted it there is no fade, it simply changes color.
I am beginning to think I am just going to throw a laptop out there instead of messing with converting everything back and forth, this is really a pain in the rear! Not to mention, I'm not sure LOR's "Show Director" can handle 30,000+ RGB channels.